Insertion junction: CLIP2.033103_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033103
Chromosome:chromosome 9
Location:5576638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409650 (1 of 18) PF12906 - RING-variant domain (RINGv) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGAGGGTCGGGCGCCAGTCTGGCAGCGCCTTGTAGCAAAAGCGGCAG
Internal bar code:CAGCGCAAAATCTCGATATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:165
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:165

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGGGAAAAGCGATCCT
Suggested primer 2:GTGTAAACGCGCGATCTGAC