Insertion junction: CLIP2.033106_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033106
Chromosome:chromosome 9
Location:1877015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397550 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACTCGCACGGGCTGAGTCAGTTCCAGATCCAGATGGCGGCGTCGCTGC
Internal bar code:TGGGGCGGGGGACGCCCTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1808
LEAP-Seq percent confirming:95.3125
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAAACGCTGGGTTATGG
Suggested primer 2:GTCTCCTCCCTGACCCTGAT