Insertion junction: CLIP2.033107_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033107
Chromosome:chromosome 11
Location:1062478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467669 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTTCCCGCCTACCGGGTTCGCCAAGACAGCCCCTTAACGCGTTTCGT
Internal bar code:ATAAAAGCACGTCCCTGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1038
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCACTGAACCAAGCAC
Suggested primer 2:AGTACAGCAAGCCCATCACC