Insertion junction: CLIP2.033109_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033109
Chromosome:chromosome 6
Location:1662328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262150 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAGCTCGAGCCTTACGGAGCCAAGCCCGCTGCTTCCCACACCTGCTAG
Internal bar code:TGGGTGGTACCATCAGGTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1567
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AGTATGGGGGAGAAGGGGTC
Suggested primer 2:AATCCACGCGTCAAGGACAT