Insertion junction: CLIP2.033111_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033111
Chromosome:chromosome 5
Location:1014375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247350 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGAGCGCGGCGGACGCGGTCCAAGCTTTCAGAGGCGAGGCGTAGCACC
Internal bar code:GTCTCCGTACATCCCCGTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTTGTTTCCTACGTGCC
Suggested primer 2:AGTTGCTGCTGTTGTTGCTG