Insertion junction: CLIP2.033122_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033122
Chromosome:chromosome 12
Location:5831132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533201 (1 of 3) PF07452 - CHRD domain (CHRD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGCGCAGTGGCCAGCGTTTGTCGGGCGCACATGTGTGTCGGTGTAT
Internal bar code:CGATTGTCTTATCTGGTGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1959
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AACCACGTCAGCCAAGCATA
Suggested primer 2:TGACGGGATTTGTTCCTCCG