Insertion junction: CLIP2.033122_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033122
Chromosome:chromosome 12
Location:5831136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533201 (1 of 3) PF07452 - CHRD domain (CHRD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACTCCCACCACTCCGCCAGCGCGTGCCTCATCACGCACACACACACA
Internal bar code:TCCGCTGGTTTATGGTCCGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1351
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGGGATTTGTTCCTCCG
Suggested primer 2:AACCACGTCAGCCAAGCATA