Insertion junction: CLIP2.033123_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033123
Chromosome:chromosome 13
Location:1945139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576200 (1 of 3) PF01048 - Phosphorylase superfamily (PNP_UDP_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCAAGCCGCCTTCCTGGCATTGTTGGACACATGTGCGGCTACCTCGA
Internal bar code:AGCTAGTACCCGGCGTTTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:948
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGAGCATAATGAGGCGG
Suggested primer 2:TCTGTGTTTTTGCCCACCCT