Insertion junction: CLIP2.033142_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033142
Chromosome:chromosome 7
Location:4372427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g341000 (1 of 4) IPR017956//IPR020478 - AT hook, DNA-binding motif // AT hook-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGCATGCTGCGCGTGCGTTTCGGATGCGGCATGTGCGCGGCCTGCC
Internal bar code:TACACAAGTATTAAGGTGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2383
LEAP-Seq percent confirming:93.1818
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCCAGTGGCATCTCGTC
Suggested primer 2:GGCGGACCTGGCATTACTT