Insertion junction: CLIP2.033145_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033145
Chromosome:chromosome 8
Location:354129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358575 TRP7 Transient receptor potential ion channel protein; (1 of 1) IPR000104//IPR002110//IPR005821//IPR020683 - Antifreeze protein, type I // Ankyrin repeat // Ion transport domain // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCCGCCGCCGCCGGCCGCACCGCCCGCAGCCGCCCCGCCAGCGCCGC
Internal bar code:GACCCGGGTAGCGGTAGTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:799
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGGGTTTGAGGATGACG
Suggested primer 2:ACTGTCAGCGTCTCCAAAGG