Insertion junction: CLIP2.033177_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033177
Chromosome:chromosome 2
Location:5248046
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112500 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTTTTCCGTGGCGCACTCGCCCACATGAGCCTCGACGTGTCCTGCCT
Internal bar code:TGTCTGAGGACCTTTGGCTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1664
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAAGCAAGGTTATCGCG
Suggested primer 2:TTGATGCAGACGGAGCTGTT