Insertion junction: CLIP2.033179_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033179
Chromosome:chromosome 4
Location:3323945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGCGCACACCTGCTGGCGCAGCGCTTGGCTGGCAGGGTGGTGTTGGC
Internal bar code:CTTCAAACTCGTTGTGAAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2890
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACACAATCAAAGCGGCACC
Suggested primer 2:GGCTGTTGCTGCTGACTCTA