Insertion junction: CLIP2.033186_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033186
Chromosome:chromosome 12
Location:2467759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507450 SYP4 Trans-Golgi network Qa-SNARE protein; (1 of 1) K08489 - syntaxin 16 (STX16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCGAGGGACCAGCCTGCAGCCTGCTCCATTCCCCTTCCTTCAAGGCC
Internal bar code:AAGTTGGGAGCGATTGACAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2172
LEAP-Seq percent confirming:92.9825
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAAGGAGCGACTGGTGAA
Suggested primer 2:ATAGCCTCCACGATCTTGCG