Insertion junction: CLIP2.033188_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033188
Chromosome:chromosome 12
Location:7732474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554700 SEC22 Qb-SNARE protein, Sec20-family; (1 of 1) K08517 - vesicle transport protein SEC22 (SEC22) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACGCCTCTCCGCGACAAGGAGGGCCTGGCTTAAATGCAATTGATATT
Internal bar code:GTGATGGAATTAAATTATAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:993
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGACTGGGTAGGACCGG
Suggested primer 2:GCCAGCTGCAGATACCGTAT