Insertion junction: CLIP2.033190_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033190
Chromosome:chromosome 1
Location:5237567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036700 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCATCCTGGAGTATCTGTCGGGCGGAGAGGTGCGGAGCTTGCTAGCTG
Internal bar code:TGGGCACCACGTGGGACCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1267
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCATCGTTCCAAATCTC
Suggested primer 2:GCCGGGCACTTGTTGATTTT