Insertion junction: CLIP2.033190_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033190
Chromosome:chromosome 1
Location:5237577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036700 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGATGAGAACCAGCCAATCGTCATCTTGTGCGGTTTCAAGGCACTTGA
Internal bar code:CTACCATGCCAAGATCCAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:6965
LEAP-Seq percent confirming:98.4375
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGGGCACTTGTTGATTTT
Suggested primer 2:GGCGCATCGTTCCAAATCTC