Insertion junction: CLIP2.033192_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033192
Chromosome:chromosome 17
Location:1007503
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703176 MSD5 (1 of 5) K04564 - superoxide dismutase, Fe-Mn family (SOD2); Mn superoxide dismutase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCACACACACAGGTACCAGGCCAAGCGGGCGGACTACACAAAGGCCT
Internal bar code:AAACGTACCGTTGGTTTCAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2737
LEAP-Seq percent confirming:65.4321
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCATCACGCACGCCTATC
Suggested primer 2:TTGCAGATGGGGTTTGGGTT