Insertion junction: CLIP2.033203_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033203
Chromosome:chromosome 11
Location:3118973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475450 (1 of 1) K11863 - Ataxin-3 (ATXN3, MJD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACGGGTGCGTGACCAGCCTCATCCGTGTCCATGCCCTGTGCGCACGG
Internal bar code:TCCCTTGGCCATGGCAACGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCATTCTCATTCTTGG
Suggested primer 2:AGGTTGCAGATGAAGGCCTC