Insertion junction: CLIP2.033207_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033207
Chromosome:chromosome 5
Location:3157839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232002 ACX2 Acyl-CoA oxidase/dehydrogenase; (1 of 2) PTHR10909//PTHR10909:SF317 - ELECTRON TRANSPORT OXIDOREDUCTASE // ACYL-COENZYME A OXIDASE 2, PEROXISOMAL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTACGTGCCGTGGCGGTGACGGCGACAGTCCGTGCAACGGCTGGATC
Internal bar code:TGTTTTTCTTGCGCACGCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACCATGGACAAGCACTC
Suggested primer 2:CAACACATCCCAACAGCTGC