Insertion junction: CLIP2.033208_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033208
Chromosome:chromosome 17
Location:3830439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727335 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTGCGGGGTGGGGAGGGCAGTCATGGTGGAAGCGCACGGGCGTCAGG
Internal bar code:GTTCGTAAAGAGTGACTTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1462
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCGCACTTCAGCTTTCT
Suggested primer 2:CGCCCTTCCAGACGTCTATC