Insertion junction: CLIP2.033215_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033215
Chromosome:chromosome 6
Location:7556252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g301500 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCAGGCGGTGGCAGGGCATGAAGCGGCGCGTTCTGTAAGAACGCTGC
Internal bar code:AAGTGAAAACGTATCGAATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1192
LEAP-Seq percent confirming:42.1053
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGAAATGCTGAAGCTGGA
Suggested primer 2:TGATGGTGGTGATGCAGGTC