Insertion junction: CLIP2.033217_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033217
Chromosome:chromosome 13
Location:992258
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g568350 BLZ18 bZIP transcription factor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCGAGGACCCTCCGTCAGTCAGCTTGCAAGAACGTGCCCTGTGTGT
Internal bar code:GTCCTGGGTTAGCCAGCTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:826
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAAAACCTCCTGGCTAT
Suggested primer 2:CATGAGGCTTGCAAAAGCGT