Insertion junction: CLIP2.033219_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033219
Chromosome:chromosome 12
Location:4399198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801411 (1 of 1) PTHR11649//PTHR11649:SF49//PTHR22916//PTHR22916:SF9 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // SUBFAMILY NOT NAMED // GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGCGACGAAGTAGGCGTCATTAGCATTCCGCACTCGCACGCAGCAG
Internal bar code:AGTATTGGTATATCCATGACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2676
LEAP-Seq percent confirming:96.3855
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGCTATGCTGCGTCGAT
Suggested primer 2:TACACCACACACTCGCACTC