Insertion junction: CLIP2.033236_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033236
Chromosome:chromosome 3
Location:775321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146107 5'UTR
Cre03.g146127 FAP96 (1 of 1) PTHR31144:SF1 - UPF0602 PROTEIN C4ORF47; Flagellar Associated Protein 96 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGAGCGACGCAGCATGCGGGGCCATTCCGTGCGCCACCCCGCACCTT
Internal bar code:CTTGGTATAGTCATGCCTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5133
LEAP-Seq percent confirming:96.9231
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTTCGTGTCACAGTGC
Suggested primer 2:GCGTGGTCTTGTTGAAACCC