Insertion junction: CLIP2.033241_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033241
Chromosome:chromosome 8
Location:4339418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384650 ELI7,ELIP7 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCAAGGCAGGTGGGCACTGGGCAGGCGTGTGTGTAGGCAGAGGCTTG
Internal bar code:GAATGTCAAACGCAGTTTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:211
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATCCGCACCTCTAGCTC
Suggested primer 2:CAGGTGTAACGACTGCAGGT