Insertion junction: CLIP2.033241_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033241
Chromosome:chromosome 8
Location:4339419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384650 ELI7,ELIP7 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCCACCCGCCTGCTTACCCCTGCCCCTGCTGTTGCTCCTCCCCCCCT
Internal bar code:CGGCCAGAGTAATGGCAGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:177
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGTAACGACTGCAGGT
Suggested primer 2:GGAATCCGCACCTCTAGCTC