Insertion junction: CLIP2.033244_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033244
Chromosome:chromosome 5
Location:2700376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre36.g759697 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGTAATAGGCCCTGTTGCGCCGGCGCTATTGGGGTCATTCTCTATAG
Internal bar code:TCAAAATCCTGGAAAGTAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:981
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGAGCGGTATCCATGTTA
Suggested primer 2:ATCTTGAAAGGCCGACTGGG