Insertion junction: CLIP2.033248_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033248
Chromosome:chromosome 17
Location:2061242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711200 PGM16 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; (1 of 1) PTHR18901//PTHR18901:SF2 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 // GLYCEROL-1-PHOSPHATE PHOSPHOHYDROLASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCCGTTTCACTTGTGTGCGTAACAGACCAGCCGGACAACGGGAGTAC
Internal bar code:TAAAAAGGTTATACGAGGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:953
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCCCAGCTCACTCAGGAT
Suggested primer 2:TCAACTTGACCCTTCGTCGG