Insertion junction: CLIP2.033251_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033251
Chromosome:chromosome 1
Location:4032466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026600 UBC11 (1 of 1) K10580 - ubiquitin-conjugating enzyme E2 N (UBE2N, BLU, UBC13); E2 Ubiquitin conjugating enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTGTCGATGCTGCGAAGGCAAGGCAAGGCGCCAAATCAAACCCCAGC
Internal bar code:ACTTATTTCGTCTGGTGTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2945
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAACATATGTGAGGCGC
Suggested primer 2:GGGTTTGGGATGGCTTAGCT