Insertion junction: CLIP2.033256_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033256
Chromosome:chromosome 3
Location:5971968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189200 (1 of 1) PTHR13192//PTHR13192:SF3 - MY011 PROTEIN // METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA TYPE D PROTEIN, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGCACCGGGCGGTTGACTGTGAGGGGTGCGCGAGCTCTACGCCCCA
Internal bar code:CGCCTATGGCGGGAAGTCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:157
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:157

Suggested primers for confirmation by PCR

Suggested primer 1:CACATTGAGGTCCGTGTGGA
Suggested primer 2:AAGAGAAGACAGGCCGTTGG