Insertion junction: CLIP2.033257_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033257
Chromosome:chromosome 1
Location:6687701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047700 CYN40 Cyclophilin 40; (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGTCACAACCGTGGTATGCTCCTGGGGACTCGCCATTCGCCCCGGCCT
Internal bar code:TGGAGAGTAGGTTCCACAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAGATTGGACGGGGGCAA
Suggested primer 2:GCGGATATGCAACAAGCCTG