Insertion junction: CLIP2.033261_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033261
Chromosome:chromosome 3
Location:3294114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165750 (1 of 1) K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACACATGCATATGTGTGGTTGCAGGTGGGAGCCCTGTTCGAGCGGCC
Internal bar code:GGGGGCCACAGGTTATTTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2369
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACTCCTCCACTCCTCCC
Suggested primer 2:ACACCAACACCAAACCCCAT