Insertion junction: CLIP2.033285_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033285
Chromosome:chromosome 14
Location:1387649
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g616950 SELENOT,SELT,SELT1 (1 of 1) PTHR13544:SF0 - SELENOPROTEIN T; Selenoprotein T intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAACAGATCTTCTCCAAGCTTGCGGAGGGCCGCATGCCCTCGGTGCCG
Internal bar code:GGAAGGCCGCGAAGCACCCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1958
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCACCACACTGATTGCT
Suggested primer 2:CCTGACTGACAACCACTCCC