Insertion junction: CLIP2.033290_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033290
Chromosome:chromosome 2
Location:1761903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086456 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGCTAACGAAAGTGCAATGGAAGTTAGTACCAACAGTCCAGCAAGT
Internal bar code:CTGGGTACCGGTTACGTACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1580
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCCTTTTGTGCAGGTCC
Suggested primer 2:ACAACCCTGCACGATTTTGC