Insertion junction: CLIP2.033313_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033313
Chromosome:chromosome 12
Location:9436233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541100 OTU7 (1 of 1) PTHR12419//PTHR12419:SF19 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED; OTU-like cysteine protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAGTGCATGCCGGGGGCCCCGCCGGAGCCCACCATCTGGACCTTTAC
Internal bar code:AGTAAGAAATTGGTTCGAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1573
LEAP-Seq percent confirming:52.1739
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCGGTGATCCAAGTGAG
Suggested primer 2:TTGCATGCACATACACGCAC