Insertion junction: CLIP2.033316_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033316
Chromosome:chromosome 12
Location:8725866
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g547450 VPS9 Guanine nucleotide exchange factor, vacuolar; (1 of 1) PF02204 - Vacuolar sorting protein 9 (VPS9) domain (VPS9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCGGTGGTGGCGCCGCCAGCGCTGAGGACGCTGACGTGGACCTGTTG
Internal bar code:GGGAGATATCGACGGCCCACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:6093
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAAGTCCAGATCCAGGT
Suggested primer 2:CGTGTCTCTTCCTGGCTTGT