Insertion junction: CLIP2.033317_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033317
Chromosome:chromosome 12
Location:236071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485000 FAP182 (1 of 2) PTHR20899:SF1 - UPF0691 PROTEIN C9ORF116; Flagellar Associated Protein 182 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGTCCGGACCCTCAATCAGGTGTGTATACGACCCTGTGACCCAAGG
Internal bar code:GCGGGAGATTATCTTCTGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1772
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTTGTCAGCGATCCACCA
Suggested primer 2:TAAGTACGTTGTCCAGCGGG