Insertion junction: CLIP2.033329_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033329
Chromosome:chromosome 10
Location:1843053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430950 RAD54B,SRH18 (1 of 1) K10875 - DNA repair and recombination protein RAD54 and RAD54-like protein (RAD54L, RAD54); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCCCACCACCATCACCACCTTCCAGCCTGCCCGTGTGCGTGCAGG
Internal bar code:ACCGCGTATTGGCTACCGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2339
LEAP-Seq percent confirming:96.2264
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCATCCTCATCCTCATC
Suggested primer 2:GAGGAGGATGCATCTCAGGC