Insertion junction: CLIP2.033329_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033329
Chromosome:chromosome 17
Location:3957280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802076 (1 of 1) IPR000104//IPR026847 - Antifreeze protein, type I // Vacuolar protein sorting-associated protein 13 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCACGAGGGGTGCTCCGGGCTCGCGCCGCTCCAAATCGGCGACCGCG
Internal bar code:AATTCACGCGTGCGAGTGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2408
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAACAACAAGCTTGCCGT
Suggested primer 2:TCGGCAGGTAATCAGGGGTA