Insertion junction: CLIP2.033331_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033331
Chromosome:chromosome 3
Location:8029752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATACATCTACCAGCGAGGAGAGTGCCTGGAATATTGTGACCAACCAGGA
Internal bar code:TTGAAGGAAAATTGCAACATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1930
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTTCTTTGCCTTGCCCG
Suggested primer 2:CACGAGCAAGCTAAATCGGC