Insertion junction: CLIP2.033335_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033335
Chromosome:chromosome 12
Location:8313767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551000 (1 of 1) PTHR33966:SF1 - PROTEIN ODR-4 HOMOLOG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCTGCCGAGTCGGCGGCGGTGGGTGACGCACTGGCGGCTTGCGCCGCC
Internal bar code:GCTTAATTAGTCGCTACTAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:844
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCTTCCCATGTGCTCT
Suggested primer 2:ATCTACCCACCTGCGTACCT