Insertion junction: CLIP2.033336_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033336
Chromosome:chromosome 7
Location:523011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316100 (1 of 1) PTHR21512//PTHR21512:SF5//PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGTCCCAGTCCCTCCTCTCCCGAGAACTCGCGGTGACCGCCTTGTCT
Internal bar code:CAACAAGAGAATGTGATCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:437
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGAGCTGATGTCGGGTC
Suggested primer 2:TCCTTTCAGTAGCCTTGCCG