Insertion junction: CLIP2.033336_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033336
Chromosome:chromosome 7
Location:523012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316100 (1 of 1) PTHR21512//PTHR21512:SF5//PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTGTGCCGTACACGGACGCATGTACACACGCTCATAGGACCCCGTCTT
Internal bar code:CCAGCATATGGAGGAGAGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1588
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTTCAGTAGCCTTGCCG
Suggested primer 2:TGTTGAGCTGATGTCGGGTC