Insertion junction: CLIP2.033344_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033344
Chromosome:chromosome 7
Location:2669673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330750 PHC43 Putative pherophorin-chlamydomonas homolog; (1 of 1) IPR006311//IPR024616 - Twin-arginine translocation pathway, signal sequence // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCACGCGTTGTTGGTCGGGCAGCCAACGTCGTTGAAGTTGAAGCAC
Internal bar code:AATGTTTTTCAGTATCACAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1808
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCTCCTTTGACACCGA
Suggested primer 2:TGCTGGACTGGAAGAACACG