Insertion junction: CLIP2.033345_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033345
Chromosome:chromosome 17
Location:3829278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727326 gene_edge/mRNA_edge/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCATAACTTGCGTCTCCTGAAGCCATAAAGCGCGGCACCGACAACGG
Internal bar code:ACCGTAGCGGTAGAAGTTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1440
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGACGTCTGGAAGGGCG
Suggested primer 2:TGCCGTTGACTCTACGCTTT