Insertion junction: CLIP2.033346_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033346
Chromosome:chromosome 5
Location:1116808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248200 (1 of 2) PTHR21493//PTHR21493:SF124 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCCGACACAACACAGGTTACGCAGCTACCCCCCGAACCGCGCCCAT
Internal bar code:GACATTGGGTGGTCACCGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1049
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAAAAGAGACCTCCACA
Suggested primer 2:TGCCACCGCAACATTTCAAG