Insertion junction: CLIP2.033347_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033347
Chromosome:chromosome 14
Location:2968655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627500 (1 of 1) PTHR18937//PTHR18937:SF259 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAATGCACGTGTACGTGTGTATCTGTACAGTCGCCCGGCGGCTGCGT
Internal bar code:TTGTACCCCGGAGTCGGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:451
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCCCCAACAAACCCATC
Suggested primer 2:CGCGATTTTGGAGCTGCTAC