Insertion junction: CLIP2.033350_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033350
Chromosome:chromosome 8
Location:3467443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378601 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCGGCAGGCTGTCAGTCTAGGTGTCCGAAGCACGCAGCAGCGTCTG
Internal bar code:GTGGTGCGGATTTCTCTTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1201
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTCCGAGTTGGTGAAT
Suggested primer 2:CAGCGTGGTATCCAGCTAGG