Insertion junction: CLIP2.033355_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033355
Chromosome:chromosome 4
Location:2803490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223900 (1 of 2) K09313 - homeobox protein cut-like (CUTL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGTGGCCACGACCGTGCCCCCTGCCCGCCAACTGGCCTTCAACCGCC
Internal bar code:TTTAGAGACTGGTGGGGCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:265
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAAGGATCAGGGCATGGC
Suggested primer 2:AGCGCTTCAACCAAAAGCTG