Insertion junction: CLIP2.033358_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033358
Chromosome:chromosome 6
Location:5561796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800698 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGACCGCTGGAGGCGGGGGCCGGGGTGCTTCCATAGCACGCCCTTCC
Internal bar code:TGTTTTTCTCCGGAGCTTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1015
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGCCACGATGATCAAAC
Suggested primer 2:GGATTGCAGCAGTCTGACCT